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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10096698 chr8:20192293 A/T WRN chr8:30891317-31031285:+ 0.55 6.45 3.34E-10 Box Plot
BLCA rs10096698 chr8:20192293 A/T XPO7 chr8:21777182-21864096:+ 0.69 7.05 8.6E-12 Box Plot
BLCA rs10101529 chr8:20328922 A/G R3HCC1 chr8:23127633-23153792:+ 0.67 6.21 1.4E-9 Box Plot
BLCA rs10101830 chr8:23797075 A/G CNOT7 chr8:17082473-17104387:- 0.8 6.12 2.35E-9 Box Plot
BLCA rs10101830 chr8:23797075 A/G DCTN6 chr8:30013813-30041156:+ 0.83 6.28 9.42E-10 Box Plot
BLCA rs10101830 chr8:23797075 A/G PPP2CB chr8:30631973-30671830:- 0.74 6.14 2.06E-9 Box Plot
BLCA rs10101830 chr8:23797075 A/G TNKS chr8:9413424-9639856:+ 0.69 6.31 7.62E-10 Box Plot
BLCA rs10101830 chr8:23797075 A/G VPS37A chr8:17104080-17159936:+ 0.84 6.58 1.59E-10 Box Plot
BLCA rs10106250 chr8:11581846 A/G AGPAT5 chr8:6565878-6617187:+ 0.75 8.91 2.06E-17 Box Plot
BLCA rs10106250 chr8:11581846 A/G ASAH1 chr8:17913501-17942507:- 0.4 6.34 6.41E-10 Box Plot
BLCA rs10106250 chr8:11581846 A/G ATP6V1B2 chr8:20054878-20084330:+ 0.5 6.6 1.35E-10 Box Plot
BLCA rs10106250 chr8:11581846 A/G BIN3 chr8:22477931-22526661:- 0.58 7.01 1.11E-11 Box Plot
BLCA rs10106250 chr8:11581846 A/G BNIP3L chr8:26240414-26363152:+ 0.56 6.39 4.93E-10 Box Plot
BLCA rs10106250 chr8:11581846 A/G CCDC25 chr8:27590828-27630170:- 0.64 6.84 3.07E-11 Box Plot
BLCA rs10106250 chr8:11581846 A/G CHMP7 chr8:23101150-23119513:+ 0.7 8.22 3.09E-15 Box Plot